IPCAPS is a framework for population or patient structure analysis where genetic determinants of admixture are organized according to highly complex architectures. IPCAPS allows biologists to analyze genome-wide data to retrieve population structure from both single-locus and multi-locus information.

IPCAPS requires some libraries from Bioconductor, please follow the installation guideline how to install Bioconductor here.

Required software

Software Descriptions Links
PLINK 1.07 Whole genome association analysis toolset download
BEAGLE 3.3.2 Genetic Analysis Software Package download
R >=3.1.2 The R Project for Statistical Computing download
Bioconductor 3.0 Tools for the analysis and comprehension of high-throughput genomic data. download
Python >=2.7.6 Python programming language download


These R-packages are required to be installed: Matrix, e1071


Reference manual contact Mr Chaichoompu
Package source contact Mr Chaichoompu